CDS

Accession Number TCMCG057C40852
gbkey CDS
Protein Id XP_018446177.1
Location complement(join(12142275..12142379,12143687..12143789,12143873..12143940,12144425..12144570,12145124..12145322,12147114..12147352,12147439..12148279))
Gene LOC108817856
GeneID 108817856
Organism Raphanus sativus

Protein

Length 566aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA344915
db_source XM_018590675.1
Definition PREDICTED: 4-coumarate--CoA ligase 3 [Raphanus sativus]

EGGNOG-MAPPER Annotation

COG_category I
Description AMP-binding enzyme C-terminal domain
KEGG_TC -
KEGG_Module M00039        [VIEW IN KEGG]
M00137        [VIEW IN KEGG]
M00350        [VIEW IN KEGG]
KEGG_Reaction R01616        [VIEW IN KEGG]
R01943        [VIEW IN KEGG]
R02194        [VIEW IN KEGG]
R02221        [VIEW IN KEGG]
R02255        [VIEW IN KEGG]
R06583        [VIEW IN KEGG]
KEGG_rclass RC00004        [VIEW IN KEGG]
RC00131        [VIEW IN KEGG]
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko00002        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
KEGG_ko ko:K01904        [VIEW IN KEGG]
EC 6.2.1.12        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway ko00130        [VIEW IN KEGG]
ko00360        [VIEW IN KEGG]
ko00940        [VIEW IN KEGG]
ko01100        [VIEW IN KEGG]
ko01110        [VIEW IN KEGG]
map00130        [VIEW IN KEGG]
map00360        [VIEW IN KEGG]
map00940        [VIEW IN KEGG]
map01100        [VIEW IN KEGG]
map01110        [VIEW IN KEGG]
GOs GO:0003674        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0007275        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009555        [VIEW IN EMBL-EBI]
GO:0009653        [VIEW IN EMBL-EBI]
GO:0009698        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010208        [VIEW IN EMBL-EBI]
GO:0010584        [VIEW IN EMBL-EBI]
GO:0010927        [VIEW IN EMBL-EBI]
GO:0016043        [VIEW IN EMBL-EBI]
GO:0016207        [VIEW IN EMBL-EBI]
GO:0016405        [VIEW IN EMBL-EBI]
GO:0016874        [VIEW IN EMBL-EBI]
GO:0016877        [VIEW IN EMBL-EBI]
GO:0016878        [VIEW IN EMBL-EBI]
GO:0019748        [VIEW IN EMBL-EBI]
GO:0022607        [VIEW IN EMBL-EBI]
GO:0030198        [VIEW IN EMBL-EBI]
GO:0032501        [VIEW IN EMBL-EBI]
GO:0032502        [VIEW IN EMBL-EBI]
GO:0032989        [VIEW IN EMBL-EBI]
GO:0043062        [VIEW IN EMBL-EBI]
GO:0044085        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0045229        [VIEW IN EMBL-EBI]
GO:0048229        [VIEW IN EMBL-EBI]
GO:0048646        [VIEW IN EMBL-EBI]
GO:0048856        [VIEW IN EMBL-EBI]
GO:0048869        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0085029        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGATAACTGCAACTCTACAAGAACCTCAGATTCACCAACCGGTGGATACAACCACCTCCCCCACCGATGCTCCTCCTTCTCCACCACCGCGTATTTTCCGATCAAAGCTTCCGGACATCGACATTCCCAACCACCTACCTCTCCACACTTACTGCTTCGAGAAGCTCCCCTCTGTTTCCGACAAGCCTTGTCTGATCGTAGGTTCCACGGGAAAAAGCTACACGTACGGCGAGACGCACCTCATATGCCGGAGAGTCGCCGCCGGGCTACACAAAACGGGGATTCGAAAAGGCGACGTGATAATGGTCCTCCTCCAAAACTCCGCCGAGTTCGTCTTCACCTTCATGGGCGCTTCCATGATCGGCGCCGTCTCCACCACCGCGAATCCTTTCTACACCTCTCAGGAGATCCACAAACAGGTCAAGTCCTCCGGAGCCAAGCTCATCGTCACTCACTCTCATTACGTCGATAAACTGAGGAACCTCGACGAGGAAACAAGAATCGGTGAAGATCTCACCGTGATCACCACGGAGGTTCCTCCGCCGGAGAATTGTCTTCCTTTCTCGGCGCTGCTGCTCGCCAAAGAAGAGGCAAACTCGCTAGATGTTGCTGTTGACGTCGGTGGCGACGATGCGGCGGCGCTTCCTTTCTCCTCTGGCACGACGGGGTTGCCGAAGGGTGTGGTTTTAACGCACAAGAGCTTGATCACGAGCGTCGCGCAACAGGTGGATGGAGAGAACCCTAATCTTTACCTGAAATCAAACGACGTCGTGCTCTGCGTTTTGCCTCTTTTCCACATCTACTCACTCAATAGCGTCCTTCTCAATTCCATCCGATCCGGTGCGACGGTTCTTTTAATGCACAAATTCGAAATCGGTGCGTTATTGGATCTAATACAGAGACACAAGGTGACGGTAGCGGCGCTTGTTCCGCCGCTTGTGATTGCTTTGGCCAAGAACCCAACTGTTAACTCTTACGATCTTTCTTCCGTTAGATTGGTTCTCTCCGGTGCAGCTCCCTTAGGCAAAGATCTCGAGGATAGTCTACGCAGCCGTCTCCCTCAGGCCGTCCTTGGCCAGGGATATGGTATGACAGAGGCAGGACCAGTGTTGTCAATGAGCCTTGGTTTTGCTAAAGAGCCAATTCCGTCAAAATCAGGCTCTTGTGGGACTGTTGTCCGAAACGCAGAGCTTAAAGTGGTTCACCTTGAGACACGTCTCTCTCTTGGCTACAACCAAACTGGTGAGATTTGTATCCGTGGTCAACAAATCATGAAAGAGTACTTGAAGGATCCGGAAGCCACGTCAGCTACAATTGACGAGGAAGGTTGGCTTCACACAGGGGACATTGGGTATGTTGACGAAGATGACGAGATATTCATTGTTGATCGACTCAAAGAGGTCATCAAGTTCAAAGGCTTTCAGGTGCCTCCGGCTGAGCTAGAGGCTTTGCTCATCAGTCACCACTCTATTGCGGATGCTGCGGTTGTTCCTCAAAGAGATGAAGTGGCTGGAGAAGTTCCGGTGGCTTTCGTAGTCCGATCAAATGGAAACGTCATCACGGAAGAAGATATAAAAGAATATATATCCAAACAGGTGGTATTCTACAAGAGATTGCACAAGGTCTTCTTTGTTCCCTCCATTCCCAAATCTCCTTCCGGAAAAATTCTGAGAAAGGATCTTAAAGCCAAACTCTGTTGA
Protein:  
MITATLQEPQIHQPVDTTTSPTDAPPSPPPRIFRSKLPDIDIPNHLPLHTYCFEKLPSVSDKPCLIVGSTGKSYTYGETHLICRRVAAGLHKTGIRKGDVIMVLLQNSAEFVFTFMGASMIGAVSTTANPFYTSQEIHKQVKSSGAKLIVTHSHYVDKLRNLDEETRIGEDLTVITTEVPPPENCLPFSALLLAKEEANSLDVAVDVGGDDAAALPFSSGTTGLPKGVVLTHKSLITSVAQQVDGENPNLYLKSNDVVLCVLPLFHIYSLNSVLLNSIRSGATVLLMHKFEIGALLDLIQRHKVTVAALVPPLVIALAKNPTVNSYDLSSVRLVLSGAAPLGKDLEDSLRSRLPQAVLGQGYGMTEAGPVLSMSLGFAKEPIPSKSGSCGTVVRNAELKVVHLETRLSLGYNQTGEICIRGQQIMKEYLKDPEATSATIDEEGWLHTGDIGYVDEDDEIFIVDRLKEVIKFKGFQVPPAELEALLISHHSIADAAVVPQRDEVAGEVPVAFVVRSNGNVITEEDIKEYISKQVVFYKRLHKVFFVPSIPKSPSGKILRKDLKAKLC